Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC188H7C350 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC188H7C350 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC188H7C350 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCDC188H7C350 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC188H7C350 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC188H7C350 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC188H7C350 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
CCDC188H7C350 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC188H7C350 TSPY5P-201ENST00000426936 936 ntBASIC17.73■□□□□ 0.43
CCDC188H7C350 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC188H7C350 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC188H7C350 DUX4L17-201ENST00000557360 1267 ntBASIC17.73■□□□□ 0.43
CCDC188H7C350 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC188H7C350 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC188H7C350 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC188H7C350 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 AC011270.2-201ENST00000624293 2550 ntBASIC17.73■□□□□ 0.43
CCDC188H7C350 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC188H7C350 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC113347.1-201ENST00000413321 391 ntBASIC17.72■□□□□ 0.43
CCDC188H7C350 AL845331.1-201ENST00000424978 1190 ntBASIC17.72■□□□□ 0.43
CCDC188H7C350 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC188H7C350 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC009533.2-201ENST00000543664 586 ntBASIC17.72■□□□□ 0.43
CCDC188H7C350 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC188H7C350 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC011840.4-201ENST00000578471 627 ntBASIC17.72■□□□□ 0.43
CCDC188H7C350 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC124864.1-201ENST00000623408 392 ntBASIC17.72■□□□□ 0.43
CCDC188H7C350 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
CCDC188H7C350 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC188H7C350 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CCDC188H7C350 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC188H7C350 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC188H7C350 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC188H7C350 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC188H7C350 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC188H7C350 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC188H7C350 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 AL021920.2-201ENST00000624828 1351 ntBASIC17.71■□□□□ 0.43
CCDC188H7C350 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC188H7C350 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CCDC188H7C350 RNF152P1-201ENST00000397754 604 ntBASIC17.71■□□□□ 0.43
CCDC188H7C350 AL137013.1-201ENST00000432946 1228 ntBASIC17.71■□□□□ 0.43
CCDC188H7C350 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC188H7C350 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms