Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ARFGEF1Q9Y6D6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ARFGEF1Q9Y6D6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ARFGEF1Q9Y6D6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.52■□□□□ 0.87
ARFGEF1Q9Y6D6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 AC138028.4-201ENST00000564984 1845 ntBASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 MIR4538-201ENST00000581377 78 ntBASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 AC068587.10-201ENST00000641210 219 ntBASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ARFGEF1Q9Y6D6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 BNIP3P42-201ENST00000454982 569 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 KRT18P34-201ENST00000488218 1270 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 BNIP3P29-201ENST00000598302 571 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 AC011447.5-201ENST00000616168 564 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 MIR6775-201ENST00000617557 69 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 LINC01451-201ENST00000623792 534 ntBASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ARFGEF1Q9Y6D6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms