Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 FRMD8P1-201ENST00000440433 1524 ntBASIC16.16■□□□□ 0.18
AP4S1Q9Y587 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AP4S1Q9Y587 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 COX5BP2-201ENST00000392354 334 ntBASIC16.15■□□□□ 0.18
AP4S1Q9Y587 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.15■□□□□ 0.18
AP4S1Q9Y587 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 ME2P1-201ENST00000426028 1970 ntBASIC16.15■□□□□ 0.18
AP4S1Q9Y587 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
AP4S1Q9Y587 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
AP4S1Q9Y587 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
AP4S1Q9Y587 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
AP4S1Q9Y587 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
AP4S1Q9Y587 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AC144831.1-201ENST00000573312 2656 ntBASIC16.14■□□□□ 0.17
AP4S1Q9Y587 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 IGHV3-52-201ENST00000519770 353 ntBASIC16.14■□□□□ 0.17
AP4S1Q9Y587 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.14■□□□□ 0.17
AP4S1Q9Y587 KRT18P6-201ENST00000555540 1265 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms