Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF6Q9Y4K3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 AL391256.1-201ENST00000443260 1855 ntBASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 FAM210CP-201ENST00000445714 574 ntBASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 AP005901.3-202ENST00000581653 237 ntBASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF6Q9Y4K3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AC008741.2-201ENST00000612792 3115 ntBASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 RCN1P1-201ENST00000400413 996 ntBASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 BX276092.5-203ENST00000456199 560 ntBASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF6Q9Y4K3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms