Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP20Q9Y2K6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AC025580.3-201ENST00000617932 1424 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AC060834.1-201ENST00000443027 2032 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 KRT18P13-201ENST00000400056 1290 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 FAM185BP-201ENST00000443595 716 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 CXCL1P1-201ENST00000502804 216 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AC040169.1-201ENST00000565382 521 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 AC009053.2-201ENST00000563701 2365 ntBASIC18.66■□□□□ 0.58
USP20Q9Y2K6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP20Q9Y2K6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 AC112482.1-201ENST00000492080 688 ntBASIC18.65■□□□□ 0.58
USP20Q9Y2K6 DUX4L17-201ENST00000557360 1267 ntBASIC18.65■□□□□ 0.58
USP20Q9Y2K6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 AC096734.2-201ENST00000562054 433 ntBASIC18.65■□□□□ 0.58
USP20Q9Y2K6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 REXO1L3P-201ENST00000622202 1288 ntBASIC18.65■□□□□ 0.58
USP20Q9Y2K6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP20Q9Y2K6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.64■□□□□ 0.58
USP20Q9Y2K6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
USP20Q9Y2K6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.64■□□□□ 0.58
USP20Q9Y2K6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 RHOQP3-201ENST00000437982 621 ntBASIC18.64■□□□□ 0.57
USP20Q9Y2K6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 KRT19P2-202ENST00000557173 1012 ntBASIC18.64■□□□□ 0.57
USP20Q9Y2K6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP20Q9Y2K6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms