Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PARPBPQ9NWS1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 AC093525.9-201ENST00000624961 1746 ntBASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 HNRNPDP1-201ENST00000439535 754 ntBASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 FDX1P1-201ENST00000449115 551 ntBASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 AC136632.2-201ENST00000512891 861 ntBASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 AC148477.8-201ENST00000624298 468 ntBASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.29■□□□□ 0.04
PARPBPQ9NWS1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 CROCCP2-202ENST00000412962 2773 ntBASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 AC005593.1-201ENST00000624894 515 ntBASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 AC116353.5-201ENST00000638148 1699 ntBASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PARPBPQ9NWS1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 HLA-A-201ENST00000376802 1334 ntBASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.27■□□□□ 0.04
PARPBPQ9NWS1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms