Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 VN2R19P-201ENST00000442399 1052 ntBASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ECHDC1Q9NTX5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 AL645728.1-201ENST00000366221 2101 ntBASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ECHDC1Q9NTX5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ECHDC1Q9NTX5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ECHDC1Q9NTX5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
ECHDC1Q9NTX5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ECHDC1Q9NTX5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 RNF216P1-203ENST00000404404 2427 ntBASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ECHDC1Q9NTX5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms