Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
POLR2J3Q9H1A7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 AC073592.5-201ENST00000624854 528 ntBASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
POLR2J3Q9H1A7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 TP73-AS1-210ENST00000637775 1455 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AC016734.2-201ENST00000624325 1377 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 AC008741.2-201ENST00000612792 3115 ntBASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
POLR2J3Q9H1A7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms