Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 RNF216P1-203ENST00000404404 2427 ntBASIC15□□□□□ -0.01
TMEM54Q969K7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 AL645728.1-201ENST00000366221 2101 ntBASIC14.99□□□□□ -0.01
TMEM54Q969K7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 AC009078.2-202ENST00000463353 338 ntBASIC14.99□□□□□ -0.01
TMEM54Q969K7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 AC117500.6-201ENST00000624871 588 ntBASIC14.99□□□□□ -0.01
TMEM54Q969K7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TMEM54Q969K7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TMEM54Q969K7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AL391256.1-201ENST00000443260 1855 ntBASIC14.98□□□□□ -0.01
TMEM54Q969K7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AC093909.1-201ENST00000504731 1122 ntBASIC14.98□□□□□ -0.01
TMEM54Q969K7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AC013467.2-201ENST00000605472 835 ntBASIC14.98□□□□□ -0.01
TMEM54Q969K7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 AC116407.3-201ENST00000623905 1129 ntBASIC14.98□□□□□ -0.01
TMEM54Q969K7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TMEM54Q969K7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TMEM54Q969K7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 HLA-A-201ENST00000376802 1334 ntBASIC14.97□□□□□ -0.01
TMEM54Q969K7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.97□□□□□ -0.01
TMEM54Q969K7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMEM54Q969K7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms