Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.71■□□□□ 0.42
ATG4AQ8WYN0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATG4AQ8WYN0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATG4AQ8WYN0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 AL391256.1-201ENST00000443260 1855 ntBASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 AC074051.2-201ENST00000565115 352 ntBASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATG4AQ8WYN0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 IER3-202ENST00000376377 1350 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 DUX4L17-201ENST00000557360 1267 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 AC087388.1-201ENST00000571370 1112 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 MIR3180-1-201ENST00000580374 94 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 MIR3180-3-201ENST00000584616 94 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 AC114341.1-201ENST00000618070 349 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 AP000867.4-201ENST00000641616 219 ntBASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATG4AQ8WYN0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
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