Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 AP001350.2-201ENST00000625104 1094 ntBASIC15.8■□□□□ 0.12
CT55Q8WUE5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CT55Q8WUE5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CT55Q8WUE5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CT55Q8WUE5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CT55Q8WUE5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.8■□□□□ 0.12
CT55Q8WUE5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CT55Q8WUE5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 KLF2P3-201ENST00000451977 1087 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 AC125807.1-201ENST00000483097 614 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 RNA5SP421-201ENST00000516864 134 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AC026150.2-201ENST00000564693 1156 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 MIR4745-201ENST00000577608 62 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AC090340.1-201ENST00000620778 4980 ntBASIC15.79■□□□□ 0.12
CT55Q8WUE5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.79■□□□□ 0.12
CT55Q8WUE5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CT55Q8WUE5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 MIR943-201ENST00000401286 94 ntBASIC15.78■□□□□ 0.12
CT55Q8WUE5 SPDYE14P-201ENST00000442619 822 ntBASIC15.78■□□□□ 0.12
CT55Q8WUE5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SLC25A39P2-201ENST00000537614 270 ntBASIC15.78■□□□□ 0.12
CT55Q8WUE5 MPDU1-223ENST00000582151 728 ntBASIC15.78■□□□□ 0.12
CT55Q8WUE5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CT55Q8WUE5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
CT55Q8WUE5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CT55Q8WUE5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms