Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 TSSC2-201ENST00000450217 709 ntBASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 AL049597.2-201ENST00000565575 961 ntBASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS37AQ8NEZ2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 TUBB7P-202ENST00000428444 1305 ntBASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS37AQ8NEZ2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 DRAXINP1-201ENST00000437611 948 ntBASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 SIGLEC30P-201ENST00000455569 941 ntBASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 FAM86EP-206ENST00000510506 987 ntBASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VPS37AQ8NEZ2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms