Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 RARRES2P10-201ENST00000564312 460 ntBASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AP000692.2-201ENST00000608391 879 ntBASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.5■□□□□ 0.07
CROCCP3Q8IVE0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 NCF1B-203ENST00000435988 1254 ntBASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 AL023875.1-201ENST00000640777 796 ntBASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CROCCP3Q8IVE0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 AC110285.5-201ENST00000611501 352 ntBASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 MIR6786-201ENST00000616843 113 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms