Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 MIR4787-201ENST00000607364 84 ntBASIC13.06□□□□□ -0.32
SNRPEP62304 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SNRPEP62304 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SNRPEP62304 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.06□□□□□ -0.32
SNRPEP62304 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SNRPEP62304 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.05□□□□□ -0.32
SNRPEP62304 SERBP1P1-201ENST00000396021 1160 ntBASIC13.05□□□□□ -0.32
SNRPEP62304 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.05□□□□□ -0.32
SNRPEP62304 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.05□□□□□ -0.32
SNRPEP62304 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 ME2P1-201ENST00000426028 1970 ntBASIC13.05□□□□□ -0.32
SNRPEP62304 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SNRPEP62304 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 AL023775.1-201ENST00000454907 1746 ntBASIC13.05□□□□□ -0.32
SNRPEP62304 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SNRPEP62304 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SNRPEP62304 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
SNRPEP62304 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.04□□□□□ -0.32
SNRPEP62304 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SNRPEP62304 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.04□□□□□ -0.32
SNRPEP62304 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.04□□□□□ -0.32
SNRPEP62304 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SNRPEP62304 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC13.04□□□□□ -0.32
SNRPEP62304 AC004987.1-201ENST00000428627 508 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms