Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 AC004835.2-201ENST00000603762 682 ntBASIC18.07■□□□□ 0.48
BRCC3P46736 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
BRCC3P46736 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.07■□□□□ 0.48
BRCC3P46736 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.07■□□□□ 0.48
BRCC3P46736 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRCC3P46736 AC090340.1-201ENST00000620778 4980 ntBASIC18.07■□□□□ 0.48
BRCC3P46736 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
BRCC3P46736 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BRCC3P46736 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 TSEN15P1-201ENST00000423257 515 ntBASIC18.06■□□□□ 0.48
BRCC3P46736 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.06■□□□□ 0.48
BRCC3P46736 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.06■□□□□ 0.48
BRCC3P46736 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.06■□□□□ 0.48
BRCC3P46736 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BRCC3P46736 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BRCC3P46736 AC092053.1-201ENST00000605787 1936 ntBASIC18.06■□□□□ 0.48
BRCC3P46736 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRCC3P46736 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.05■□□□□ 0.48
BRCC3P46736 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.05■□□□□ 0.48
BRCC3P46736 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.05■□□□□ 0.48
BRCC3P46736 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.05■□□□□ 0.48
BRCC3P46736 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.05■□□□□ 0.48
BRCC3P46736 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 AC093028.1-201ENST00000622998 982 ntBASIC18.05■□□□□ 0.48
BRCC3P46736 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.05■□□□□ 0.48
BRCC3P46736 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.05■□□□□ 0.48
BRCC3P46736 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.05■□□□□ 0.48
BRCC3P46736 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRCC3P46736 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
BRCC3P46736 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.04■□□□□ 0.48
BRCC3P46736 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 LINC02012-201ENST00000608206 1725 ntBASIC18.04■□□□□ 0.48
BRCC3P46736 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRCC3P46736 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 AC141586.5-201ENST00000624546 2050 ntBASIC18.04■□□□□ 0.48
BRCC3P46736 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRCC3P46736 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.04■□□□□ 0.48
BRCC3P46736 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.04■□□□□ 0.48
BRCC3P46736 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
BRCC3P46736 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.04■□□□□ 0.48
BRCC3P46736 AC093520.2-201ENST00000561830 333 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms