Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC107918.2-201ENST00000530817 355 ntBASIC16.95■□□□□ 0.3
HMGCLP35914 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGCLP35914 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGCLP35914 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGCLP35914 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGCLP35914 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 PRORSD1P-202ENST00000563365 2154 ntBASIC16.94■□□□□ 0.3
HMGCLP35914 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
HMGCLP35914 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGCLP35914 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGCLP35914 AC034105.1-201ENST00000563488 319 ntBASIC16.94■□□□□ 0.3
HMGCLP35914 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HMGCLP35914 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.94■□□□□ 0.3
HMGCLP35914 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 AC104109.2-201ENST00000602919 1418 ntBASIC16.94■□□□□ 0.3
HMGCLP35914 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGCLP35914 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGCLP35914 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGCLP35914 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HMGCLP35914 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.93■□□□□ 0.3
HMGCLP35914 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGCLP35914 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 VN2R19P-201ENST00000442399 1052 ntBASIC16.93■□□□□ 0.3
HMGCLP35914 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.93■□□□□ 0.3
HMGCLP35914 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 MIR4751-201ENST00000578027 74 ntBASIC16.93■□□□□ 0.3
HMGCLP35914 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 AC120114.3-201ENST00000611923 658 ntBASIC16.93■□□□□ 0.3
HMGCLP35914 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
HMGCLP35914 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HMGCLP35914 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGCLP35914 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGCLP35914 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGCLP35914 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms