Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.17■□□□□ 0.18
NCK1P16333 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NCK1P16333 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NCK1P16333 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 AL049757.1-201ENST00000616842 1596 ntBASIC16.17■□□□□ 0.18
NCK1P16333 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 AL135999.2-201ENST00000622438 1686 ntBASIC16.16■□□□□ 0.18
NCK1P16333 STARP1-201ENST00000397973 869 ntBASIC16.16■□□□□ 0.18
NCK1P16333 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.16■□□□□ 0.18
NCK1P16333 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.16■□□□□ 0.18
NCK1P16333 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NCK1P16333 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NCK1P16333 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 KRT8P10-201ENST00000450021 1447 ntBASIC16.16■□□□□ 0.18
NCK1P16333 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 AC024909.3-201ENST00000611513 2257 ntBASIC16.16■□□□□ 0.18
NCK1P16333 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCK1P16333 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.16■□□□□ 0.18
NCK1P16333 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.16■□□□□ 0.18
NCK1P16333 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 AC105917.1-201ENST00000506637 2539 ntBASIC16.15■□□□□ 0.18
NCK1P16333 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NCK1P16333 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 AL359075.1-203ENST00000462729 1002 ntBASIC16.15■□□□□ 0.18
NCK1P16333 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 COX11P1-201ENST00000489116 835 ntBASIC16.15■□□□□ 0.18
NCK1P16333 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 AC010203.1-204ENST00000548782 407 ntBASIC16.15■□□□□ 0.18
NCK1P16333 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.15■□□□□ 0.18
NCK1P16333 AL390719.2-201ENST00000606993 987 ntBASIC16.15■□□□□ 0.18
NCK1P16333 AC011558.1-201ENST00000623459 338 ntBASIC16.15■□□□□ 0.18
NCK1P16333 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.15■□□□□ 0.18
NCK1P16333 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCK1P16333 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCK1P16333 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.15■□□□□ 0.18
NCK1P16333 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.15■□□□□ 0.18
NCK1P16333 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms