Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MTCL1P1-201ENST00000446207 792 ntBASIC17.59■□□□□ 0.41
BRAFP15056 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BRAFP15056 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAFP15056 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAFP15056 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.59■□□□□ 0.41
BRAFP15056 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAFP15056 AL139327.4-201ENST00000612362 153 ntBASIC17.59■□□□□ 0.41
BRAFP15056 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.59■□□□□ 0.41
BRAFP15056 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAFP15056 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BRAFP15056 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAFP15056 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BRAFP15056 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.59■□□□□ 0.41
BRAFP15056 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BRAFP15056 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.59■□□□□ 0.41
BRAFP15056 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
BRAFP15056 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.59■□□□□ 0.41
BRAFP15056 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BRAFP15056 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BRAFP15056 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.59■□□□□ 0.41
BRAFP15056 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
BRAFP15056 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAFP15056 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAFP15056 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
BRAFP15056 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAFP15056 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAFP15056 NSUN5P1-202ENST00000421140 1535 ntBASIC17.58■□□□□ 0.41
BRAFP15056 NSUN5P2-203ENST00000457352 1529 ntBASIC17.58■□□□□ 0.41
BRAFP15056 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.58■□□□□ 0.41
BRAFP15056 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BRAFP15056 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAFP15056 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BRAFP15056 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BRAFP15056 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.58■□□□□ 0.4
BRAFP15056 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
BRAFP15056 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.58■□□□□ 0.4
BRAFP15056 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.58■□□□□ 0.4
BRAFP15056 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BRAFP15056 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.58■□□□□ 0.4
BRAFP15056 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 AC093525.9-201ENST00000624961 1746 ntBASIC17.58■□□□□ 0.4
BRAFP15056 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BRAFP15056 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BRAFP15056 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 SLC25A1P3-201ENST00000395415 828 ntBASIC17.57■□□□□ 0.4
BRAFP15056 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.57■□□□□ 0.4
BRAFP15056 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.57■□□□□ 0.4
BRAFP15056 VENTXP7-201ENST00000475503 772 ntBASIC17.57■□□□□ 0.4
BRAFP15056 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.57■□□□□ 0.4
BRAFP15056 FOSL1P1-201ENST00000511041 816 ntBASIC17.57■□□□□ 0.4
BRAFP15056 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.57■□□□□ 0.4
BRAFP15056 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.57■□□□□ 0.4
BRAFP15056 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 AC005336.2-201ENST00000593183 939 ntBASIC17.57■□□□□ 0.4
BRAFP15056 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 AC092068.3-201ENST00000587894 2016 ntBASIC17.57■□□□□ 0.4
BRAFP15056 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.57■□□□□ 0.4
BRAFP15056 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.57■□□□□ 0.4
BRAFP15056 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BRAFP15056 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms