Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.97■□□□□ 0.15
OPN1SWP03999 TMPOP1-202ENST00000424642 1267 ntBASIC15.97■□□□□ 0.15
OPN1SWP03999 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 AC246785.2-201ENST00000432512 513 ntBASIC15.97■□□□□ 0.15
OPN1SWP03999 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.97■□□□□ 0.15
OPN1SWP03999 AC009533.2-201ENST00000543664 586 ntBASIC15.97■□□□□ 0.15
OPN1SWP03999 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 AC073592.5-201ENST00000624854 528 ntBASIC15.97■□□□□ 0.15
OPN1SWP03999 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.97■□□□□ 0.15
OPN1SWP03999 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.97■□□□□ 0.15
OPN1SWP03999 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPN1SWP03999 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
OPN1SWP03999 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
OPN1SWP03999 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 BX276092.5-203ENST00000456199 560 ntBASIC15.96■□□□□ 0.15
OPN1SWP03999 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 VENTXP7-201ENST00000475503 772 ntBASIC15.96■□□□□ 0.15
OPN1SWP03999 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.96■□□□□ 0.15
OPN1SWP03999 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.96■□□□□ 0.15
OPN1SWP03999 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 AC046158.3-201ENST00000624947 2558 ntBASIC15.96■□□□□ 0.15
OPN1SWP03999 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
OPN1SWP03999 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.96■□□□□ 0.15
OPN1SWP03999 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPN1SWP03999 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.96■□□□□ 0.14
OPN1SWP03999 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.96■□□□□ 0.14
OPN1SWP03999 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
OPN1SWP03999 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
OPN1SWP03999 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
OPN1SWP03999 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
OPN1SWP03999 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
OPN1SWP03999 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPN1SWP03999 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.95■□□□□ 0.14
OPN1SWP03999 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
OPN1SWP03999 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
OPN1SWP03999 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.95■□□□□ 0.14
OPN1SWP03999 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPN1SWP03999 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.95■□□□□ 0.14
OPN1SWP03999 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPN1SWP03999 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
OPN1SWP03999 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
OPN1SWP03999 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
OPN1SWP03999 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms