Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC010654.1-201ENST00000615722 808 ntBASIC16.43■□□□□ 0.22
CPNE3O75131 AC004790.2-201ENST00000623588 572 ntBASIC16.43■□□□□ 0.22
CPNE3O75131 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE3O75131 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 PTCHD3P3-201ENST00000403073 906 ntBASIC16.42■□□□□ 0.22
CPNE3O75131 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.42■□□□□ 0.22
CPNE3O75131 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.42■□□□□ 0.22
CPNE3O75131 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 LINC00896-202ENST00000609602 2128 ntBASIC16.42■□□□□ 0.22
CPNE3O75131 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE3O75131 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE3O75131 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE3O75131 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 AC080080.1-201ENST00000625121 2420 ntBASIC16.41■□□□□ 0.22
CPNE3O75131 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 AC046185.3-201ENST00000623228 1824 ntBASIC16.41■□□□□ 0.22
CPNE3O75131 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 HCG4B-203ENST00000450128 991 ntBASIC16.41■□□□□ 0.22
CPNE3O75131 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE3O75131 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE3O75131 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CPNE3O75131 AC134043.2-201ENST00000624206 2238 ntBASIC16.41■□□□□ 0.22
CPNE3O75131 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE3O75131 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CPNE3O75131 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms