Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 AP000523.1-201ENST00000398242 1049 ntBASIC12.83□□□□□ -0.36
SNAI2O43623 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.83□□□□□ -0.36
SNAI2O43623 AL390955.1-201ENST00000428694 934 ntBASIC12.83□□□□□ -0.36
SNAI2O43623 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.83□□□□□ -0.36
SNAI2O43623 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.83□□□□□ -0.36
SNAI2O43623 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.83□□□□□ -0.36
SNAI2O43623 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.83□□□□□ -0.36
SNAI2O43623 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.83□□□□□ -0.36
SNAI2O43623 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNAI2O43623 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNAI2O43623 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNAI2O43623 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.82□□□□□ -0.36
SNAI2O43623 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.82□□□□□ -0.36
SNAI2O43623 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.82□□□□□ -0.36
SNAI2O43623 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
SNAI2O43623 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SNAI2O43623 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 SLC25A1P3-201ENST00000395415 828 ntBASIC12.82□□□□□ -0.36
SNAI2O43623 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNAI2O43623 AC002558.1-201ENST00000488906 803 ntBASIC12.82□□□□□ -0.36
SNAI2O43623 AC112698.1-201ENST00000510299 916 ntBASIC12.82□□□□□ -0.36
SNAI2O43623 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.82□□□□□ -0.36
SNAI2O43623 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNAI2O43623 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SNAI2O43623 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNAI2O43623 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.82□□□□□ -0.36
SNAI2O43623 AC144831.1-201ENST00000573312 2656 ntBASIC12.82□□□□□ -0.36
SNAI2O43623 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
SNAI2O43623 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNAI2O43623 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.81□□□□□ -0.36
SNAI2O43623 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SNAI2O43623 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SNAI2O43623 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNAI2O43623 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms