Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 HNRNPUP1-201ENST00000554987 333 ntBASIC18.21■□□□□ 0.51
CEP290O15078 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CEP290O15078 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CEP290O15078 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CEP290O15078 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CEP290O15078 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.21■□□□□ 0.51
CEP290O15078 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CEP290O15078 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CEP290O15078 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CEP290O15078 KRT18P34-201ENST00000488218 1270 ntBASIC18.21■□□□□ 0.5
CEP290O15078 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.21■□□□□ 0.5
CEP290O15078 MIR4722-201ENST00000578292 60 ntBASIC18.21■□□□□ 0.5
CEP290O15078 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 KLF2P4-201ENST00000451959 1225 ntBASIC18.2■□□□□ 0.5
CEP290O15078 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.2■□□□□ 0.5
CEP290O15078 SLC25A47P1-201ENST00000531577 414 ntBASIC18.2■□□□□ 0.5
CEP290O15078 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.2■□□□□ 0.5
CEP290O15078 AC105129.2-201ENST00000559536 390 ntBASIC18.2■□□□□ 0.5
CEP290O15078 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.2■□□□□ 0.5
CEP290O15078 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 AL118558.3-201ENST00000607414 1079 ntBASIC18.2■□□□□ 0.5
CEP290O15078 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.2■□□□□ 0.5
CEP290O15078 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 NOC2LP1-202ENST00000452600 2235 ntBASIC18.2■□□□□ 0.5
CEP290O15078 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CEP290O15078 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
CEP290O15078 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CEP290O15078 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.2■□□□□ 0.5
CEP290O15078 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.2■□□□□ 0.5
CEP290O15078 RRP7BP-205ENST00000566851 833 ntBASIC18.2■□□□□ 0.5
CEP290O15078 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.19■□□□□ 0.5
CEP290O15078 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.19■□□□□ 0.5
CEP290O15078 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CEP290O15078 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.19■□□□□ 0.5
CEP290O15078 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CEP290O15078 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.19■□□□□ 0.5
CEP290O15078 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.19■□□□□ 0.5
CEP290O15078 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.18■□□□□ 0.5
CEP290O15078 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.18■□□□□ 0.5
CEP290O15078 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.18■□□□□ 0.5
CEP290O15078 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.18■□□□□ 0.5
CEP290O15078 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.18■□□□□ 0.5
CEP290O15078 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.18■□□□□ 0.5
CEP290O15078 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.18■□□□□ 0.5
CEP290O15078 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CEP290O15078 FADS2-212ENST00000522639 360 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms