Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM235A6NFC5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM235A6NFC5 FRMD8P1-201ENST00000440433 1524 ntBASIC14.61□□□□□ -0.07
TMEM235A6NFC5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 LINC01568-207ENST00000641790 1380 ntBASIC14.61□□□□□ -0.07
TMEM235A6NFC5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 AC007967.3-201ENST00000434308 558 ntBASIC14.61□□□□□ -0.07
TMEM235A6NFC5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM235A6NFC5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms