Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 LINC02012-201ENST00000608206 1725 ntBASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 KRT18P32-201ENST00000424695 1287 ntBASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 AC067863.1-201ENST00000494933 530 ntBASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HS3ST3A1Q9Y663 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 FAM58DP-201ENST00000428076 619 ntBASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 CYP2A7P1-201ENST00000595391 815 ntBASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 AP001059.3-201ENST00000619053 235 ntBASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HS3ST3A1Q9Y663 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.6■□□□□ 0.25
HS3ST3A1Q9Y663 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms