Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AP001005.1-201ENST00000571755 1248 ntBASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AC117500.6-201ENST00000624871 588 ntBASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDHGC3Q9UN70 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 AC107918.2-201ENST00000530817 355 ntBASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 HLA-A-201ENST00000376802 1334 ntBASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGC3Q9UN70 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 FLJ38576-201ENST00000623820 2459 ntBASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 AC092910.1-201ENST00000482027 1129 ntBASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 AC116407.3-201ENST00000623905 1129 ntBASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 AL391256.1-201ENST00000443260 1855 ntBASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGC3Q9UN70 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 AC006277.1-201ENST00000624348 1610 ntBASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 AC108073.2-201ENST00000464002 357 ntBASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 AC093909.1-201ENST00000504731 1122 ntBASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms