Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.63■□□□□ 0.73
USP25Q9UHP3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP25Q9UHP3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CHCHD2P8-201ENST00000429873 447 ntBASIC19.62■□□□□ 0.73
USP25Q9UHP3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 AL121672.3-201ENST00000608644 468 ntBASIC19.62■□□□□ 0.73
USP25Q9UHP3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 AC093525.9-201ENST00000624961 1746 ntBASIC19.62■□□□□ 0.73
USP25Q9UHP3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP25Q9UHP3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
USP25Q9UHP3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 CYP2T1P-202ENST00000641596 2535 ntBASIC19.61■□□□□ 0.73
USP25Q9UHP3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 BX276092.5-203ENST00000456199 560 ntBASIC19.61■□□□□ 0.73
USP25Q9UHP3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 STK25P1-201ENST00000585406 838 ntBASIC19.61■□□□□ 0.73
USP25Q9UHP3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP25Q9UHP3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.61■□□□□ 0.73
USP25Q9UHP3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 AL353593.2-201ENST00000602529 1483 ntBASIC19.6■□□□□ 0.73
USP25Q9UHP3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
USP25Q9UHP3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP25Q9UHP3 KRT8P10-201ENST00000450021 1447 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms