Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 MIR4751-201ENST00000578027 74 ntBASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.27■□□□□ 0.84
CLIP2Q9UDT6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLIP2Q9UDT6 AC011676.5-201ENST00000624864 2660 ntBASIC20.27■□□□□ 0.83
CLIP2Q9UDT6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLIP2Q9UDT6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.27■□□□□ 0.83
CLIP2Q9UDT6 AL590787.1-201ENST00000568856 1315 ntBASIC20.27■□□□□ 0.83
CLIP2Q9UDT6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIP2Q9UDT6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 AP002414.1-201ENST00000391405 1147 ntBASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 AC023274.1-201ENST00000418278 595 ntBASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 VN2R19P-201ENST00000442399 1052 ntBASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIP2Q9UDT6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 AC133963.1-201ENST00000504166 1679 ntBASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 AC040169.1-201ENST00000565382 521 ntBASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CLIP2Q9UDT6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.23■□□□□ 0.83
CLIP2Q9UDT6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIP2Q9UDT6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms