Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 AL513523.2-202ENST00000427283 2040 ntBASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CDC42SE2Q9NRR3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 HLA-A-202ENST00000376806 1854 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC246785.2-201ENST00000432512 513 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC083849.1-201ENST00000615227 514 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC006011.2-201ENST00000621313 1158 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AC073912.3-201ENST00000624414 853 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AL662844.4-201ENST00000606367 2838 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 AL645728.1-201ENST00000366221 2101 ntBASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CDC42SE2Q9NRR3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.77□□□□□ -0.52
CDC42SE2Q9NRR3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms