Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CYP2D8P-201ENST00000433633 1490 ntBASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 KRT89P-201ENST00000620027 1478 ntBASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ECEL1P3-201ENST00000427961 737 ntBASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 AC010947.1-201ENST00000623454 693 ntBASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
C12orf4Q9NQ89 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
C12orf4Q9NQ89 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 AC007950.2-201ENST00000615045 2347 ntBASIC14.92□□□□□ -0.02
C12orf4Q9NQ89 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms