Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AC016396.2-201ENST00000562575 1417 ntBASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 AL138688.1-201ENST00000624851 1594 ntBASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ZNF304Q9HCX3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 AC068880.1-201ENST00000507289 2297 ntBASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 AC141586.5-201ENST00000624546 2050 ntBASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 PGAM5P1-201ENST00000518923 814 ntBASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 AC040169.1-201ENST00000565382 521 ntBASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ZNF304Q9HCX3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF304Q9HCX3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF304Q9HCX3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms