Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP000525.1-201ENST00000608286 694 ntBASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 PAUPAR-201ENST00000630360 2965 ntBASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 OR2I1P-209ENST00000641730 5365 ntBASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AL390955.1-201ENST00000428694 934 ntBASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SND1-IT1Q9HBX3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 AC105917.1-201ENST00000506637 2539 ntBASIC11.48□□□□□ -0.57
SND1-IT1Q9HBX3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms