Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
SLIRPQ9GZT3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLIRPQ9GZT3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.03■□□□□ -0
SLIRPQ9GZT3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.03■□□□□ -0
SLIRPQ9GZT3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.03■□□□□ -0
SLIRPQ9GZT3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLIRPQ9GZT3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.02■□□□□ -0
SLIRPQ9GZT3 TUBB7P-202ENST00000428444 1305 ntBASIC15.02■□□□□ -0
SLIRPQ9GZT3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.02■□□□□ -0
SLIRPQ9GZT3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLIRPQ9GZT3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 AC112698.1-201ENST00000510299 916 ntBASIC15.02■□□□□ -0
SLIRPQ9GZT3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 DGCR10-201ENST00000609839 495 ntBASIC15.02■□□□□ -0
SLIRPQ9GZT3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.02■□□□□ -0
SLIRPQ9GZT3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLIRPQ9GZT3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 AC026748.1-201ENST00000624349 3251 ntBASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLIRPQ9GZT3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLIRPQ9GZT3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms