Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 CYP2T1P-202ENST00000641596 2535 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.27■□□□□ 0.04
CNN2Q99439 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.27■□□□□ 0.04
CNN2Q99439 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CNN2Q99439 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CNN2Q99439 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CNN2Q99439 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.27■□□□□ 0.04
CNN2Q99439 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.27■□□□□ 0.04
CNN2Q99439 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.27■□□□□ 0.04
CNN2Q99439 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.27■□□□□ 0.04
CNN2Q99439 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.27■□□□□ 0.04
CNN2Q99439 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.27■□□□□ 0.04
CNN2Q99439 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CNN2Q99439 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CNN2Q99439 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.27■□□□□ 0.03
CNN2Q99439 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNN2Q99439 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNN2Q99439 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNN2Q99439 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CNN2Q99439 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CNN2Q99439 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.27■□□□□ 0.03
CNN2Q99439 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.27■□□□□ 0.03
CNN2Q99439 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CNN2Q99439 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 PCDHB17P-201ENST00000539533 2393 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 AC026691.1-201ENST00000602502 2017 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNN2Q99439 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.26■□□□□ 0.03
CNN2Q99439 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNN2Q99439 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 AC246785.2-201ENST00000432512 513 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 VENTXP7-201ENST00000475503 772 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 AC063952.2-201ENST00000498792 1227 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 AC009533.2-201ENST00000543664 586 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CNN2Q99439 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 HLA-A-202ENST00000376806 1854 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CNN2Q99439 AC132938.5-201ENST00000624980 1813 ntBASIC15.26■□□□□ 0.03
CNN2Q99439 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
CNN2Q99439 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNN2Q99439 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CNN2Q99439 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNN2Q99439 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNN2Q99439 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNN2Q99439 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNN2Q99439 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.25■□□□□ 0.03
CNN2Q99439 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNN2Q99439 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms