Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 LINC00896-202ENST00000609602 2128 ntBASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 FOXO1B-201ENST00000504678 1527 ntBASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CRAMP1Q96RY5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 SPTLC1P1-201ENST00000447199 261 ntBASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRAMP1Q96RY5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.65■□□□□ 0.9
CRAMP1Q96RY5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.64■□□□□ 0.9
CRAMP1Q96RY5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRAMP1Q96RY5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CRAMP1Q96RY5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.64■□□□□ 0.9
CRAMP1Q96RY5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 AC116353.5-201ENST00000638148 1699 ntBASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.64■□□□□ 0.89
CRAMP1Q96RY5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRAMP1Q96RY5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CRAMP1Q96RY5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.63■□□□□ 0.89
CRAMP1Q96RY5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.63■□□□□ 0.89
CRAMP1Q96RY5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CRAMP1Q96RY5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms