Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP3S1Q92572 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3S1Q92572 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3S1Q92572 AC026271.2-201ENST00000428091 497 ntBASIC15.1■□□□□ 0.01
AP3S1Q92572 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.1■□□□□ 0.01
AP3S1Q92572 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 MIR5787-201ENST00000611784 55 ntBASIC15.1■□□□□ 0.01
AP3S1Q92572 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 EGFEM1P-202ENST00000431685 1563 ntBASIC15.1■□□□□ 0.01
AP3S1Q92572 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S1Q92572 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
AP3S1Q92572 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S1Q92572 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S1Q92572 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3S1Q92572 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3S1Q92572 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.09■□□□□ 0.01
AP3S1Q92572 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 AP003041.3-201ENST00000527151 707 ntBASIC15.09■□□□□ 0.01
AP3S1Q92572 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 AL391256.1-201ENST00000443260 1855 ntBASIC15.09■□□□□ 0.01
AP3S1Q92572 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S1Q92572 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.09■□□□□ 0.01
AP3S1Q92572 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
AP3S1Q92572 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S1Q92572 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
AP3S1Q92572 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.08■□□□□ 0.01
AP3S1Q92572 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
AP3S1Q92572 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms