Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 AC004449.1-201ENST00000564240 433 ntBASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 ACTL9-202ENST00000612068 1252 ntBASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 AC105339.1-204ENST00000636249 355 ntBASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 AL645728.2-201ENST00000641974 660 ntBASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 AL121761.2-201ENST00000598007 1648 ntBASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NDUFA11Q86Y39 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 REXO1L11P-201ENST00000620964 1927 ntBASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 FAM86C2P-203ENST00000528684 1004 ntBASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 AC011467.4-201ENST00000594891 528 ntBASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 AC106028.4-201ENST00000614509 607 ntBASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NDUFA11Q86Y39 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 SLC25A6P2-201ENST00000497974 877 ntBASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AC025678.2-201ENST00000562061 970 ntBASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 LINC02084-201ENST00000606069 1096 ntBASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AC093028.1-201ENST00000622998 982 ntBASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA11Q86Y39 AC006116.8-202ENST00000587620 1550 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms