Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RAPH1Q70E73 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAPH1Q70E73 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.22■□□□□ 0.35
RAPH1Q70E73 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAPH1Q70E73 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 PCDHA1-201ENST00000378133 2726 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 AL845331.1-201ENST00000424978 1190 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 AL136038.3-201ENST00000561909 1096 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 STK25P1-201ENST00000585406 838 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 AL353801.3-201ENST00000609898 542 ntBASIC17.21■□□□□ 0.35
RAPH1Q70E73 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
RAPH1Q70E73 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAPH1Q70E73 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.34
RAPH1Q70E73 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
RAPH1Q70E73 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 RCN1P1-201ENST00000400413 996 ntBASIC17.2■□□□□ 0.34
RAPH1Q70E73 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 TMPOP1-202ENST00000424642 1267 ntBASIC17.2■□□□□ 0.34
RAPH1Q70E73 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 STK19B-204ENST00000512515 211 ntBASIC17.2■□□□□ 0.34
RAPH1Q70E73 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
RAPH1Q70E73 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAPH1Q70E73 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms