Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCNI2Q6ZMN8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 BX276092.7-203ENST00000637198 1536 ntBASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 TPSP2-201ENST00000561760 610 ntBASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCNI2Q6ZMN8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCNI2Q6ZMN8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 KRT18P13-201ENST00000400056 1290 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 MRPL3P1-201ENST00000400109 1033 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 LINC00265-3P-201ENST00000447588 903 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 AL121912.1-201ENST00000603683 238 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 AC120114.3-201ENST00000611923 658 ntBASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCNI2Q6ZMN8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms