Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 TSPY16P-201ENST00000449843 468 ntBASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 AC069335.1-201ENST00000489972 472 ntBASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 KRT8P48-201ENST00000515599 1220 ntBASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 FAM86C2P-203ENST00000528684 1004 ntBASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CTC1Q2NKJ3 AL590787.1-201ENST00000568856 1315 ntBASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 TFAMP1-201ENST00000412727 736 ntBASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AL513480.1-201ENST00000451731 511 ntBASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AC099522.2-201ENST00000607001 744 ntBASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTC1Q2NKJ3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 AL671277.1-201ENST00000429656 993 ntBASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 IGHV3-52-201ENST00000519770 353 ntBASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTC1Q2NKJ3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 AC005237.2-201ENST00000434368 219 ntBASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 FAM207CP-201ENST00000443486 507 ntBASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 UGT1A2P-201ENST00000454886 866 ntBASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 AP001059.3-201ENST00000619053 235 ntBASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.21■□□□□ 0.51
CTC1Q2NKJ3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms