Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
ITGA8P53708 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
ITGA8P53708 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 AC003669.1-201ENST00000334569 611 ntBASIC17.56■□□□□ 0.4
ITGA8P53708 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 KLF4P1-201ENST00000412782 1185 ntBASIC17.56■□□□□ 0.4
ITGA8P53708 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.56■□□□□ 0.4
ITGA8P53708 AC090616.6-201ENST00000582640 721 ntBASIC17.56■□□□□ 0.4
ITGA8P53708 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.56■□□□□ 0.4
ITGA8P53708 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ITGA8P53708 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.56■□□□□ 0.4
ITGA8P53708 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ITGA8P53708 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.56■□□□□ 0.4
ITGA8P53708 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.56■□□□□ 0.4
ITGA8P53708 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.56■□□□□ 0.4
ITGA8P53708 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ITGA8P53708 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ITGA8P53708 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ITGA8P53708 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.55■□□□□ 0.4
ITGA8P53708 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 AC104076.2-201ENST00000448912 469 ntBASIC17.55■□□□□ 0.4
ITGA8P53708 AL671277.2-201ENST00000458060 996 ntBASIC17.55■□□□□ 0.4
ITGA8P53708 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 AC063952.2-201ENST00000498792 1227 ntBASIC17.55■□□□□ 0.4
ITGA8P53708 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.55■□□□□ 0.4
ITGA8P53708 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.55■□□□□ 0.4
ITGA8P53708 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.55■□□□□ 0.4
ITGA8P53708 AL513523.2-202ENST00000427283 2040 ntBASIC17.55■□□□□ 0.4
ITGA8P53708 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.55■□□□□ 0.4
ITGA8P53708 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.55■□□□□ 0.4
ITGA8P53708 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ITGA8P53708 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.55■□□□□ 0.4
ITGA8P53708 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.55■□□□□ 0.4
ITGA8P53708 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ITGA8P53708 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.54■□□□□ 0.4
ITGA8P53708 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ITGA8P53708 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
ITGA8P53708 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
ITGA8P53708 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.54■□□□□ 0.4
ITGA8P53708 AD001527.2-201ENST00000622994 785 ntBASIC17.54■□□□□ 0.4
ITGA8P53708 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 ALOX12P2-203ENST00000570921 1945 ntBASIC17.54■□□□□ 0.4
ITGA8P53708 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITGA8P53708 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.54■□□□□ 0.4
ITGA8P53708 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ITGA8P53708 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
ITGA8P53708 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms