Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 AC104640.1-201ENST00000562617 2109 ntBASIC16.6■□□□□ 0.25
CLCN2P51788 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLCN2P51788 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLCN2P51788 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLCN2P51788 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLCN2P51788 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLCN2P51788 REXO1L11P-201ENST00000620964 1927 ntBASIC16.59■□□□□ 0.25
CLCN2P51788 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN2P51788 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN2P51788 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.59■□□□□ 0.25
CLCN2P51788 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.59■□□□□ 0.25
CLCN2P51788 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.59■□□□□ 0.25
CLCN2P51788 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 AC114341.1-201ENST00000618070 349 ntBASIC16.59■□□□□ 0.25
CLCN2P51788 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.59■□□□□ 0.25
CLCN2P51788 TP73-AS1-210ENST00000637775 1455 ntBASIC16.59■□□□□ 0.25
CLCN2P51788 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.59■□□□□ 0.25
CLCN2P51788 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLCN2P51788 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.58■□□□□ 0.25
CLCN2P51788 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CLCN2P51788 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN2P51788 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
CLCN2P51788 LYSMD4-203ENST00000378904 2122 ntBASIC16.58■□□□□ 0.25
CLCN2P51788 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN2P51788 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.58■□□□□ 0.25
CLCN2P51788 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLCN2P51788 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 AC004870.1-201ENST00000315132 882 ntBASIC16.58■□□□□ 0.24
CLCN2P51788 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN2P51788 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN2P51788 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.58■□□□□ 0.24
CLCN2P51788 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCN2P51788 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.58■□□□□ 0.24
CLCN2P51788 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCN2P51788 AL591684.3-201ENST00000605187 298 ntBASIC16.58■□□□□ 0.24
CLCN2P51788 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLCN2P51788 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN2P51788 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLCN2P51788 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN2P51788 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN2P51788 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN2P51788 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN2P51788 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLCN2P51788 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 LINC00554-201ENST00000564841 3011 ntBASIC16.57■□□□□ 0.24
CLCN2P51788 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 KRT8P47-201ENST00000604727 1398 ntBASIC16.57■□□□□ 0.24
CLCN2P51788 AC097374.2-201ENST00000618617 1306 ntBASIC16.57■□□□□ 0.24
CLCN2P51788 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCN2P51788 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCN2P51788 MIR5100-201ENST00000579544 119 ntBASIC16.57■□□□□ 0.24
CLCN2P51788 RN7SL510P-201ENST00000581311 263 ntBASIC16.57■□□□□ 0.24
CLCN2P51788 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCN2P51788 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms