Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 EGFEM1P-202ENST00000431685 1563 ntBASIC21.48■■□□□ 1.03
COL15A1P39059 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL15A1P39059 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.48■■□□□ 1.03
COL15A1P39059 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.48■■□□□ 1.03
COL15A1P39059 LINC02560-201ENST00000596379 459 ntBASIC21.48■■□□□ 1.03
COL15A1P39059 AC008267.7-201ENST00000624570 1194 ntBASIC21.48■■□□□ 1.03
COL15A1P39059 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
COL15A1P39059 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.47■■□□□ 1.03
COL15A1P39059 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.47■■□□□ 1.03
COL15A1P39059 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL15A1P39059 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.47■■□□□ 1.03
COL15A1P39059 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.47■■□□□ 1.03
COL15A1P39059 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
COL15A1P39059 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.47■■□□□ 1.03
COL15A1P39059 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.47■■□□□ 1.03
COL15A1P39059 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL15A1P39059 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.47■■□□□ 1.03
COL15A1P39059 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.46■■□□□ 1.03
COL15A1P39059 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
COL15A1P39059 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.46■■□□□ 1.03
COL15A1P39059 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
COL15A1P39059 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.46■■□□□ 1.03
COL15A1P39059 AC097493.3-201ENST00000509725 367 ntBASIC21.46■■□□□ 1.03
COL15A1P39059 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.46■■□□□ 1.03
COL15A1P39059 AC027307.2-201ENST00000591252 911 ntBASIC21.46■■□□□ 1.03
COL15A1P39059 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL15A1P39059 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.46■■□□□ 1.03
COL15A1P39059 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
COL15A1P39059 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.45■■□□□ 1.03
COL15A1P39059 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC21.45■■□□□ 1.02
COL15A1P39059 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.45■■□□□ 1.02
COL15A1P39059 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 AC091167.2-201ENST00000579581 588 ntBASIC21.45■■□□□ 1.02
COL15A1P39059 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL15A1P39059 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
COL15A1P39059 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.45■■□□□ 1.02
COL15A1P39059 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 AC016027.1-202ENST00000607927 1699 ntBASIC21.44■■□□□ 1.02
COL15A1P39059 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.44■■□□□ 1.02
COL15A1P39059 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL15A1P39059 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.44■■□□□ 1.02
COL15A1P39059 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.44■■□□□ 1.02
COL15A1P39059 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL15A1P39059 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.44■■□□□ 1.02
COL15A1P39059 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
COL15A1P39059 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.44■■□□□ 1.02
COL15A1P39059 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL15A1P39059 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL15A1P39059 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL15A1P39059 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 AC005332.8-201ENST00000622750 2735 ntBASIC21.43■■□□□ 1.02
COL15A1P39059 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL15A1P39059 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms