Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFSF4P23510 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
TNFSF4P23510 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFSF4P23510 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 AL023806.1-201ENST00000603994 1649 ntBASIC14.63□□□□□ -0.07
TNFSF4P23510 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 AP002414.1-201ENST00000391405 1147 ntBASIC14.63□□□□□ -0.07
TNFSF4P23510 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFSF4P23510 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.63□□□□□ -0.07
TNFSF4P23510 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFSF4P23510 GGTLC5P-201ENST00000617623 998 ntBASIC14.63□□□□□ -0.07
TNFSF4P23510 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFSF4P23510 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFSF4P23510 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFSF4P23510 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFSF4P23510 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFSF4P23510 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFSF4P23510 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 ELK2BP-201ENST00000415014 1224 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 AL590627.1-203ENST00000421194 1026 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 KRT18P27-201ENST00000427733 1299 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFSF4P23510 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFSF4P23510 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFSF4P23510 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFSF4P23510 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TNFSF4P23510 MIR7706-201ENST00000613747 67 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 AC093525.9-201ENST00000624961 1746 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 AL805961.1-202ENST00000641562 540 ntBASIC14.62□□□□□ -0.07
TNFSF4P23510 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFSF4P23510 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.62□□□□□ -0.07
TNFSF4P23510 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFSF4P23510 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms