Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -02e-12■■■□□ 14.9
RPS3P23396 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.04■□□□□ -02e-12■■■□□ 14.9
RPS3P23396 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.04■□□□□ -02e-12■■■□□ 14.9
RPS3P23396 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15□□□□□ -0.012e-12■■■□□ 14.9
RPS3P23396 PIM2-202ENST00000442430 892 ntTSL 212.6□□□□□ -0.392e-6■■■□□ 14.9
RPS3P23396 CTSA-213ENST00000606782 582 ntTSL 312.85□□□□□ -0.352e-8■■■□□ 14.9
RPS3P23396 ATRAID-204ENST00000472515 561 ntTSL 23.76□□□□□ -1.819e-8■■■□□ 14.9
RPS3P23396 DDB1-224ENST00000545894 2282 ntTSL 211.14□□□□□ -0.631e-7■■■□□ 14.9
RPS3P23396 SQLE-205ENST00000521232 711 ntTSL 316.5■□□□□ 0.233e-8■■■□□ 14.9
RPS3P23396 CBFA2T3-204ENST00000563640 664 ntTSL 215.05■□□□□ -06e-7■■■□□ 14.9
RPS3P23396 RDH11-209ENST00000557273 562 ntTSL 39.63□□□□□ -0.871e-6■■■□□ 14.9
RPS3P23396 RDH11-205ENST00000553816 1163 ntTSL 27.98□□□□□ -1.131e-6■■■□□ 14.9
RPS3P23396 GTSF1-203ENST00000546739 567 ntTSL 41.95□□□□□ -2.13e-8■■■□□ 14.9
RPS3P23396 STXBP3-202ENST00000469338 294 ntTSL 217.2■□□□□ 0.344e-6■■■□□ 14.9
RPS3P23396 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.334e-6■■■□□ 14.9
RPS3P23396 STXBP3-204ENST00000483586 561 ntTSL 216.43■□□□□ 0.224e-6■■■□□ 14.9
RPS3P23396 HYAL2-206ENST00000428028 571 ntTSL 317■□□□□ 0.312e-6■■■□□ 14.9
RPS3P23396 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.14e-7■■■□□ 14.9
RPS3P23396 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.664e-7■■■□□ 14.9
RPS3P23396 MLF2-205ENST00000537126 851 ntTSL 516.49■□□□□ 0.234e-7■■■□□ 14.9
RPS3P23396 SAP18-205ENST00000485646 804 ntTSL 216.59■□□□□ 0.253e-8■■■□□ 14.9
RPS3P23396 HNRNPL-207ENST00000598985 900 ntTSL 513.79□□□□□ -0.22e-9■■■□□ 14.9
RPS3P23396 RDH11-211ENST00000557726 621 ntTSL 312.21□□□□□ -0.452e-6■■■□□ 14.9
RPS3P23396 RDH11-210ENST00000557331 553 ntTSL 49.67□□□□□ -0.862e-6■■■□□ 14.9
RPS3P23396 LSR-211ENST00000602044 658 ntTSL 511.95□□□□□ -0.51e-9■■■□□ 14.9
RPS3P23396 KDM5B-207ENST00000472822 1648 ntTSL 1 (best)9.05□□□□□ -0.961e-6■■■□□ 14.9
RPS3P23396 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.512e-7■■■□□ 14.9
RPS3P23396 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.62e-7■■■□□ 14.9
RPS3P23396 CTSB-226ENST00000532656 573 ntTSL 416.3■□□□□ 0.25e-9■■■□□ 14.9
RPS3P23396 CTSB-213ENST00000527215 545 ntTSL 415.59■□□□□ 0.095e-9■■■□□ 14.9
RPS3P23396 CTSB-231ENST00000534382 764 ntTSL 414.15□□□□□ -0.145e-9■■■□□ 14.9
RPS3P23396 ALYREF-203ENST00000511412 533 ntTSL 323.71■■□□□ 1.391e-15■■■□□ 14.9
RPS3P23396 ATP1A1-204ENST00000418797 654 ntTSL 319.02■□□□□ 0.642e-11■■■□□ 14.9
RPS3P23396 TAPBP-237ENST00000467025 751 ntTSL 312.08□□□□□ -0.486e-8■■■□□ 14.9
RPS3P23396 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.47■■□□□ 1.513e-11■■■□□ 14.9
RPS3P23396 RPS20-203ENST00000519369 824 ntTSL 213.05□□□□□ -0.323e-11■■■□□ 14.9
RPS3P23396 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.413e-11■■■□□ 14.9
RPS3P23396 RPS20-209ENST00000521289 737 ntTSL 510.44□□□□□ -0.743e-11■■■□□ 14.9
RPS3P23396 RPS20-212ENST00000618656 627 ntTSL 3 BASIC9.26□□□□□ -0.933e-11■■■□□ 14.9
RPS3P23396 RPS20-207ENST00000520627 423 ntTSL 5 BASIC9.03□□□□□ -0.963e-11■■■□□ 14.9
RPS3P23396 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.13e-11■■■□□ 14.9
RPS3P23396 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.21□□□□□ -1.13e-11■■■□□ 14.9
RPS3P23396 RPS20-206ENST00000520490 402 ntTSL 37.95□□□□□ -1.143e-11■■■□□ 14.9
RPS3P23396 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.52□□□□□ -1.23e-11■■■□□ 14.9
RPS3P23396 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.03□□□□□ -1.283e-11■■■□□ 14.9
RPS3P23396 ALB-215ENST00000510166 532 ntTSL 38.6□□□□□ -1.031e-323■■■□□ 14.9
RPS3P23396 ALB-218ENST00000515133 665 ntTSL 22.69□□□□□ -1.981e-323■■■□□ 14.9
RPS3P23396 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.659e-7■■■□□ 14.9
RPS3P23396 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.59□□□□□ -1.191e-323■■■□□ 14.9
RPS3P23396 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.59□□□□□ -1.511e-323■■■□□ 14.9
RPS3P23396 ALB-205ENST00000476441 1604 ntTSL 55.59□□□□□ -1.511e-323■■■□□ 14.9
RPS3P23396 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.45□□□□□ -1.541e-323■■■□□ 14.9
RPS3P23396 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.26□□□□□ -1.571e-323■■■□□ 14.9
RPS3P23396 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.04□□□□□ -1.61e-323■■■□□ 14.9
RPS3P23396 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.651e-323■■■□□ 14.9
RPS3P23396 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.44□□□□□ -1.71e-323■■■□□ 14.9
RPS3P23396 ALB-216ENST00000511370 1519 ntTSL 55.4□□□□□ -1.541e-323■■■□□ 14.9
RPS3P23396 TRAP1-207ENST00000571804 781 ntTSL 522.57■■□□□ 1.22e-10■■■□□ 14.9
RPS3P23396 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.921e-9■■■□□ 14.9
RPS3P23396 RPL11-204ENST00000467075 377 ntTSL 312.97□□□□□ -0.332e-21■■■□□ 14.9
RPS3P23396 UGDH-210ENST00000514106 568 ntTSL 415.56■□□□□ 0.083e-14■■■□□ 14.9
RPS3P23396 UGDH-212ENST00000515398 584 ntTSL 515.56■□□□□ 0.083e-14■■■□□ 14.9
RPS3P23396 UGDH-203ENST00000503779 575 ntTSL 415.52■□□□□ 0.083e-14■■■□□ 14.9
RPS3P23396 UGDH-207ENST00000509391 577 ntTSL 315.52■□□□□ 0.083e-14■■■□□ 14.9
RPS3P23396 SHMT2-218ENST00000555213 611 ntTSL 310.7□□□□□ -0.73e-9■■■□□ 14.9
RPS3P23396 UGDH-209ENST00000510881 549 ntTSL 34.12□□□□□ -1.753e-14■■■□□ 14.9
RPS3P23396 CD46-217ENST00000493796 408 ntTSL 52.55□□□□□ -27e-11■■■□□ 14.9
RPS3P23396 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-7■■■□□ 14.9
RPS3P23396 SLC35F6-203ENST00000429494 3738 ntTSL 1 (best)10.48□□□□□ -0.735e-7■■■□□ 14.9
RPS3P23396 SLC35F6-202ENST00000414029 3605 ntTSL 1 (best)9.31□□□□□ -0.925e-7■■■□□ 14.9
RPS3P23396 ALB-211ENST00000505649 1509 ntTSL 55.87□□□□□ -1.471e-323■■■□□ 14.9
RPS3P23396 SULT1A1-205ENST00000562058 1876 ntTSL 1 (best)20.16■□□□□ 0.822e-6■■■□□ 14.9
RPS3P23396 SULT1A1-207ENST00000564818 1653 ntTSL 1 (best)19.77■□□□□ 0.762e-6■■■□□ 14.9
RPS3P23396 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.54■□□□□ 0.722e-6■■■□□ 14.9
RPS3P23396 SULT1A1-206ENST00000563493 1651 ntTSL 519.23■□□□□ 0.672e-6■■■□□ 14.9
RPS3P23396 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.432e-6■■■□□ 14.9
RPS3P23396 SULT1A1-210ENST00000567998 7948 ntTSL 215.18■□□□□ 0.022e-6■■■□□ 14.9
RPS3P23396 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.332e-6■■■□□ 14.9
RPS3P23396 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.392e-6■■■□□ 14.9
RPS3P23396 FBLN1-216ENST00000465578 481 ntTSL 512.38□□□□□ -0.435e-8■■■□□ 14.9
RPS3P23396 SULT1A1-209ENST00000567512 615 ntTSL 312.06□□□□□ -0.482e-6■■■□□ 14.9
RPS3P23396 SULT1A1-208ENST00000566189 939 ntTSL 511.91□□□□□ -0.52e-6■■■□□ 14.9
RPS3P23396 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.552e-6■■■□□ 14.9
RPS3P23396 CEACAM1-211ENST00000485605 678 ntTSL 55.44□□□□□ -1.542e-6■■■□□ 14.9
RPS3P23396 NFE2L1-209ENST00000579889 568 ntTSL 312.85□□□□□ -0.359e-11■■■□□ 14.9
RPS3P23396 GPRC5C-208ENST00000581590 1554 ntAPPRIS ALT2 TSL 520.61■□□□□ 0.896e-8■■■□□ 14.9
RPS3P23396 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.48□□□□□ -0.091e-9■■■□□ 14.9
RPS3P23396 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.12□□□□□ -0.151e-9■■■□□ 14.9
RPS3P23396 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.92■□□□□ 0.461e-7■■■□□ 14.9
RPS3P23396 PSMD8-204ENST00000591216 611 ntTSL 317.35■□□□□ 0.371e-7■■■□□ 14.9
RPS3P23396 PSMD8-208ENST00000592561 771 ntTSL 210.77□□□□□ -0.691e-7■■■□□ 14.9
RPS3P23396 PSMD8-206ENST00000592001 853 ntTSL 27.58□□□□□ -1.21e-7■■■□□ 14.9
RPS3P23396 ATP5D-206ENST00000591249 405 ntTSL 516.13■□□□□ 0.179e-10■■■□□ 14.9
RPS3P23396 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.325e-7■■■□□ 14.8
RPS3P23396 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.632e-6■■■□□ 14.8
RPS3P23396 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.582e-6■■■□□ 14.8
RPS3P23396 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.234e-21■■■□□ 14.8
RPS3P23396 PEG10-204ENST00000493935 763 ntTSL 412.04□□□□□ -0.484e-21■■■□□ 14.8
RPS3P23396 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC11.41□□□□□ -0.584e-21■■■□□ 14.8
RPS3P23396 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.21□□□□□ -1.14e-21■■■□□ 14.8
Retrieved 100 of 24,271 protein–RNA pairs in 40.5 ms