Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC2P18074 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ERCC2P18074 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC2P18074 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC2P18074 RNA5SP419-201ENST00000515908 135 ntBASIC17.57■□□□□ 0.4
ERCC2P18074 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC2P18074 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC2P18074 AL356488.2-201ENST00000602755 427 ntBASIC17.57■□□□□ 0.4
ERCC2P18074 MIR7706-201ENST00000613747 67 ntBASIC17.57■□□□□ 0.4
ERCC2P18074 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
ERCC2P18074 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ERCC2P18074 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ERCC2P18074 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.56■□□□□ 0.4
ERCC2P18074 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.56■□□□□ 0.4
ERCC2P18074 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC2P18074 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC2P18074 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 MIR1199-201ENST00000621445 119 ntBASIC17.56■□□□□ 0.4
ERCC2P18074 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ERCC2P18074 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.56■□□□□ 0.4
ERCC2P18074 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC2P18074 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ERCC2P18074 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
ERCC2P18074 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC2P18074 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
ERCC2P18074 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.55■□□□□ 0.4
ERCC2P18074 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.55■□□□□ 0.4
ERCC2P18074 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.55■□□□□ 0.4
ERCC2P18074 AF228730.7-201ENST00000641842 219 ntBASIC17.55■□□□□ 0.4
ERCC2P18074 PCDHB17P-201ENST00000539533 2393 ntBASIC17.55■□□□□ 0.4
ERCC2P18074 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ERCC2P18074 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 NKILA-202ENST00000614771 2598 ntBASIC17.55■□□□□ 0.4
ERCC2P18074 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.55■□□□□ 0.4
ERCC2P18074 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC2P18074 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ERCC2P18074 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.54■□□□□ 0.4
ERCC2P18074 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms