Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.96□□□□□ -0.18
DEFA4P12838 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.96□□□□□ -0.18
DEFA4P12838 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.18
DEFA4P12838 AC092171.3-201ENST00000610122 2651 ntBASIC13.96□□□□□ -0.18
DEFA4P12838 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
DEFA4P12838 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.95□□□□□ -0.18
DEFA4P12838 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.95□□□□□ -0.18
DEFA4P12838 RNF126P1-202ENST00000569893 925 ntBASIC13.95□□□□□ -0.18
DEFA4P12838 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 IGHV3-41-201ENST00000613121 348 ntBASIC13.95□□□□□ -0.18
DEFA4P12838 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
DEFA4P12838 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
DEFA4P12838 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
DEFA4P12838 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.94□□□□□ -0.18
DEFA4P12838 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.94□□□□□ -0.18
DEFA4P12838 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.94□□□□□ -0.18
DEFA4P12838 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 AC011840.4-201ENST00000578471 627 ntBASIC13.94□□□□□ -0.18
DEFA4P12838 AC090616.6-201ENST00000582640 721 ntBASIC13.94□□□□□ -0.18
DEFA4P12838 AC011498.5-201ENST00000592027 486 ntBASIC13.94□□□□□ -0.18
DEFA4P12838 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 AC124864.1-201ENST00000623408 392 ntBASIC13.94□□□□□ -0.18
DEFA4P12838 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
DEFA4P12838 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DEFA4P12838 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
DEFA4P12838 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.93□□□□□ -0.18
DEFA4P12838 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DEFA4P12838 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms