Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 POM121L3P-201ENST00000419331 1163 ntBASIC18.22■□□□□ 0.51
FAM228BP0C875 AP000867.3-201ENST00000524675 377 ntBASIC18.22■□□□□ 0.51
FAM228BP0C875 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.22■□□□□ 0.51
FAM228BP0C875 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.22■□□□□ 0.51
FAM228BP0C875 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 AC073592.4-201ENST00000623827 446 ntBASIC18.22■□□□□ 0.51
FAM228BP0C875 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
FAM228BP0C875 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.22■□□□□ 0.51
FAM228BP0C875 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 AC008741.2-201ENST00000612792 3115 ntBASIC18.22■□□□□ 0.51
FAM228BP0C875 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.22■□□□□ 0.51
FAM228BP0C875 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 PKD1P1-201ENST00000458669 6805 ntBASIC18.22■□□□□ 0.51
FAM228BP0C875 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.22■□□□□ 0.51
FAM228BP0C875 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FAM228BP0C875 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.21■□□□□ 0.51
FAM228BP0C875 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
FAM228BP0C875 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.21■□□□□ 0.51
FAM228BP0C875 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
FAM228BP0C875 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 ABCD1P5-201ENST00000445663 754 ntBASIC18.21■□□□□ 0.51
FAM228BP0C875 AC104819.1-201ENST00000504587 486 ntBASIC18.21■□□□□ 0.51
FAM228BP0C875 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.21■□□□□ 0.51
FAM228BP0C875 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
FAM228BP0C875 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.21■□□□□ 0.51
FAM228BP0C875 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 AC026691.1-201ENST00000602502 2017 ntBASIC18.21■□□□□ 0.51
FAM228BP0C875 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
FAM228BP0C875 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.21■□□□□ 0.51
FAM228BP0C875 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
FAM228BP0C875 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FAM228BP0C875 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.21■□□□□ 0.5
FAM228BP0C875 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 AL391005.1-201ENST00000623953 2435 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 ALOX12P2-203ENST00000570921 1945 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM228BP0C875 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.2■□□□□ 0.5
FAM228BP0C875 AP002414.1-201ENST00000391405 1147 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
FAM228BP0C875 LINC00982-205ENST00000420957 435 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.2■□□□□ 0.5
FAM228BP0C875 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM228BP0C875 FAM210CP-201ENST00000445714 574 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM228BP0C875 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.2■□□□□ 0.5
FAM228BP0C875 AP002490.2-201ENST00000524791 560 ntBASIC18.2■□□□□ 0.5
FAM228BP0C875 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM228BP0C875 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
FAM228BP0C875 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM228BP0C875 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms