Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINGO3P0C6S8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LINGO3P0C6S8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LINGO3P0C6S8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.58■□□□□ 0.25
LINGO3P0C6S8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.58■□□□□ 0.25
LINGO3P0C6S8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 AL590326.2-201ENST00000625139 305 ntBASIC16.58■□□□□ 0.24
LINGO3P0C6S8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 CROCCP1-201ENST00000426910 5675 ntBASIC16.58■□□□□ 0.24
LINGO3P0C6S8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LINGO3P0C6S8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 LINC01311-201ENST00000565162 1445 ntBASIC16.57■□□□□ 0.24
LINGO3P0C6S8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 AL671277.2-201ENST00000458060 996 ntBASIC16.57■□□□□ 0.24
LINGO3P0C6S8 AC083849.1-201ENST00000615227 514 ntBASIC16.57■□□□□ 0.24
LINGO3P0C6S8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 RNF216P1-203ENST00000404404 2427 ntBASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LINGO3P0C6S8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 SNX18-202ENST00000343017 3140 ntBASIC16.56■□□□□ 0.24
LINGO3P0C6S8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.56■□□□□ 0.24
LINGO3P0C6S8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms