Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
PCCBP05166 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.88■□□□□ 0.29
PCCBP05166 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.88■□□□□ 0.29
PCCBP05166 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
PCCBP05166 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
PCCBP05166 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.88■□□□□ 0.29
PCCBP05166 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.88■□□□□ 0.29
PCCBP05166 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.88■□□□□ 0.29
PCCBP05166 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.88■□□□□ 0.29
PCCBP05166 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCCBP05166 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.88■□□□□ 0.29
PCCBP05166 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCCBP05166 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCCBP05166 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PCCBP05166 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.87■□□□□ 0.29
PCCBP05166 AC005829.1-201ENST00000570002 483 ntBASIC16.87■□□□□ 0.29
PCCBP05166 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.87■□□□□ 0.29
PCCBP05166 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.87■□□□□ 0.29
PCCBP05166 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 AC134684.3-201ENST00000641758 218 ntBASIC16.87■□□□□ 0.29
PCCBP05166 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCCBP05166 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.87■□□□□ 0.29
PCCBP05166 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.87■□□□□ 0.29
PCCBP05166 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PCCBP05166 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 HTR5BP-201ENST00000430851 1154 ntBASIC16.86■□□□□ 0.29
PCCBP05166 FAM58CP-201ENST00000435741 640 ntBASIC16.86■□□□□ 0.29
PCCBP05166 AC004967.1-201ENST00000453589 447 ntBASIC16.86■□□□□ 0.29
PCCBP05166 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.86■□□□□ 0.29
PCCBP05166 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
PCCBP05166 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCCBP05166 MIR4469-201ENST00000583919 79 ntBASIC16.86■□□□□ 0.29
PCCBP05166 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCCBP05166 C20orf181-201ENST00000623918 480 ntBASIC16.86■□□□□ 0.29
PCCBP05166 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.86■□□□□ 0.29
PCCBP05166 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms