Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNND1O60716 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CTNND1O60716 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
CTNND1O60716 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 TOP3BP1-201ENST00000420768 1380 ntBASIC19.85■□□□□ 0.77
CTNND1O60716 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 MIR943-201ENST00000401286 94 ntBASIC19.85■□□□□ 0.77
CTNND1O60716 BASP1P1-201ENST00000430708 665 ntBASIC19.85■□□□□ 0.77
CTNND1O60716 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.85■□□□□ 0.77
CTNND1O60716 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.85■□□□□ 0.77
CTNND1O60716 AC091167.2-201ENST00000579581 588 ntBASIC19.85■□□□□ 0.77
CTNND1O60716 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.85■□□□□ 0.77
CTNND1O60716 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 EGFEM1P-202ENST00000431685 1563 ntBASIC19.85■□□□□ 0.77
CTNND1O60716 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTNND1O60716 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CTNND1O60716 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNND1O60716 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 RNU1-129P-201ENST00000384064 167 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 AC107890.1-201ENST00000422478 521 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.84■□□□□ 0.77
CTNND1O60716 MIR3909-201ENST00000579518 119 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 U1.21-201ENST00000580816 167 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNND1O60716 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 SLC22A20-204ENST00000530038 1673 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 AC090340.1-201ENST00000620778 4980 ntBASIC19.84■□□□□ 0.77
CTNND1O60716 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTNND1O60716 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
CTNND1O60716 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNND1O60716 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNND1O60716 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CTNND1O60716 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CTNND1O60716 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CTNND1O60716 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNND1O60716 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 SPDYE7P-202ENST00000420373 878 ntBASIC19.83■□□□□ 0.77
CTNND1O60716 SPDYE14P-201ENST00000442619 822 ntBASIC19.83■□□□□ 0.77
CTNND1O60716 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 AC140878.1-201ENST00000565277 250 ntBASIC19.83■□□□□ 0.77
CTNND1O60716 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.83■□□□□ 0.77
CTNND1O60716 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNND1O60716 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNND1O60716 AC008267.7-201ENST00000624570 1194 ntBASIC19.83■□□□□ 0.77
CTNND1O60716 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms